SelectionRecord

class roadrunner.SelectionRecord(str)

RoadRunner provides a range of flexible ways of selecting values from a simulation. These values can not only be calculated directly via RoadRunner.getSelectionValue, but any of these selections can be used as columns in the simulate result matrix.

The SectionRecord.selectionType should be one of the constants listed here.

p1 and p2 may be required along with the attribute to set certain selection types that use one or more arguments.

Below is the list of attributes which are FOR ADVANCED USERS ONLY. For simplified usage, refer to Selecting Values.

SelectionRecord.ALL

SelectionRecord.ALL_DEPENDENT

SelectionRecord.ALL_DEPENDENT_AMOUNT

SelectionRecord.ALL_DEPENDENT_CONCENTRATION

SelectionRecord.ALL_INDEPENDENT

SelectionRecord.ALL_INDEPENDENT_AMOUNT

SelectionRecord.ALL_INDEPENDENT_CONCENTRATION

SelectionRecord.AMOUNT: species must have either a CONCENTRATION or AMOUNT modifer to distinguish it.

SelectionRecord.BOUNDARY: species must have either a BOUNDARY or FLOATING modifiers.

SelectionRecord.BOUNDARY_AMOUNT: boundary species amount

SelectionRecord.BOUNDARY_CONCENTRATION: boundary species concentration

SelectionRecord._COMPARTMENT: Compartments and parameters can be either current or initial values. These values with and underscore, ‘_’ are intended to be used with either an CURRENT or INITIAL value modifier.

SelectionRecord.COMPARTMENT: the current compartment value

SelectionRecord.CONCENTRATION: species must have either a CONCENTRATION or AMOUNT modifer to distinguish it.

SelectionRecord.CONSREVED_MOIETY

SelectionRecord.CONTROL: scaled control coefficient of designated arguments.

SelectionRecord.CURRENT

SelectionRecord.DEPENDENT

SelectionRecord.EIGENVALUE: real part of eigenvalue of designated identifier.

SelectionRecord.EIGENVALUE_COMPLEX: complex part of eigenvalue of designated identifier.

SelectionRecord.ELASTICITY: scaled elasticity coefficient of designated arguments.

SelectionRecord.ELEMENT

SelectionRecord.FLOATING: species must have either a BOUNDARY or FLOATING modifiers.

SelectionRecord.FLOATING_AMOUNT: floating species current amounts.

SelectionRecord.FLOATING_AMOUNT_RATE: floating species amount rates (value, not reaction rates)

SelectionRecord.FLOATING_CONCENTRATION: floating species current concentrations.

SelectionRecord.FLOATING_CONCENTRATION_RATE

SelectionRecord.GLOBAL_PARAMETER: the current global parameter value

SelectionRecord.INDEPENDENT

SelectionRecord.INITIAL

SelectionRecord.INITIAL_FLOATING_AMOUNT: initial amount of designated identifier.

SelectionRecord.INITIAL_FLOATING_CONCENTRATION: initial concentration of designated identifier.

SelectionRecord.RATE

SelectionRecord.REACTION

SelectionRecord.REACTION_RATE: current reaction rate

SelectionRecord.STOICHIOMETRY: stoichiometric coefficient of designated identifier and reaction.

SelectionRecord.TIME

SelectionRecord.UNKNOWN

SelectionRecord.UNKNOWN_CONCENTRATION

SelectionRecord.UNKNOWN_ELEMENT

SelectionRecord.UNSCALED

SelectionRecord.UNSCALED_CONTROL: unscaled control coefficient of designated arguments.

SelectionRecord.UNSCALED_ELASTICITY: unscaled elasticity coefficient of designated arguments.

SelectionRecord.index int

SelectionRecord.p1 str: first of the arguments

SelectionRecord.p2 str: second of the arguments

SelectionRecord.selectionType int