RoadRunner with Multiprocessing ================================ For these simulations we use a simple model that we can access easily from one of RoadRunners test suites. Its called ``BatchImmigrationDeath03`` and is model number ``00039`` from the stochastic sbml test suite. In each of the following sections we use RoadRunner to generate 1e6 stochastic simulations. Serial code ------------ Performing the simulations in serial gives us a way to measure the performance enhancements of using parallel code. .. literalinclude:: gillespie_simulations_serial.py :linenos: :language: python Multiprocessing library ------------------------ The simplest way in Python to use multiple cores simultaneously for running RoadRunner simulations is to use the `multiprocessing `_ library. Further, the simplest multiprocessing tool that one can use is a `multiprocessing.Pool`. This leads to about a x3 speed up for this example. .. literalinclude:: gillespie_simulations_multiprocessing_pool.py :linenos: :language: python Ray library ------------ .. literalinclude:: gillespie_simulations_ray_library.py :linenos: :language: python