libRoadRunner C++ API  1.3
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rr::ExecutableModel Member List

This is the complete list of members for rr::ExecutableModel, including all inherited members.

applyEvents(double timeEnd, const unsigned char *previousEventStatus, const double *initialState, double *finalState)=0rr::ExecutableModelpure virtual
computeAllRatesOfChange()rr::ExecutableModelinline
ExecutableModelFlags enum namerr::ExecutableModel
getBoundarySpeciesAmounts(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getBoundarySpeciesConcentrations(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getCompartmentInitVolumes(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getCompartmentVolumes(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getEventIndex(const std::string &eid)=0rr::ExecutableModelpure virtual
getEventRoots(double time, const double *y, double *gdot)=0rr::ExecutableModelpure virtual
getEventTriggers(int len, const int *indx, unsigned char *values)=0rr::ExecutableModelpure virtual
getExecutableModelDesc() const =0rr::ExecutableModelpure virtual
getFlags() const =0rr::ExecutableModelpure virtual
getFloatingSpeciesAmountRate(int index, const double *reactionRates)=0rr::ExecutableModelpure virtual
getFloatingSpeciesAmounts(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getFloatingSpeciesConcentrations(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getFloatingSpeciesInitAmounts(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getFloatingSpeciesInitConcentrations(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getGlobalParameterId(int index)=0rr::ExecutableModelpure virtual
getGlobalParameterIndex(const std::string &eid)=0rr::ExecutableModelpure virtual
getGlobalParameterValues(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getIds(int types, std::list< std::string > &ids)=0rr::ExecutableModelpure virtual
getModelName()=0rr::ExecutableModelpure virtual
getNumBoundarySpecies()=0rr::ExecutableModelpure virtual
getNumDepFloatingSpecies()=0rr::ExecutableModelpure virtual
getNumFloatingSpecies()=0rr::ExecutableModelpure virtual
getNumGlobalParameters()=0rr::ExecutableModelpure virtual
getNumIndFloatingSpecies()=0rr::ExecutableModelpure virtual
getNumReactions()=0rr::ExecutableModelpure virtual
getRandom()=0rr::ExecutableModelpure virtual
getRandomSeed()=0rr::ExecutableModelpure virtual
getRateRuleSymbols() const rr::ExecutableModelinlinevirtual
getRateRuleValues(double *rateRuleValues)=0rr::ExecutableModelpure virtual
getReactionId(int index)=0rr::ExecutableModelpure virtual
getReactionIndex(const std::string &eid)=0rr::ExecutableModelpure virtual
getReactionRates(int len, int const *indx, double *values)=0rr::ExecutableModelpure virtual
getStateVector(double *stateVector)=0rr::ExecutableModelpure virtual
getStateVectorId(int index)=0rr::ExecutableModelpure virtual
getStateVectorRate(double time, const double *y, double *dydt=0)=0rr::ExecutableModelpure virtual
getStoichiometry(int speciesIndex, int reactionIndex)=0rr::ExecutableModelpure virtual
getStoichiometryMatrix(int *rows, int *cols, double **data)=0rr::ExecutableModelpure virtual
getSupportedIdTypes()=0rr::ExecutableModelpure virtual
getValue(const std::string &id)=0rr::ExecutableModelpure virtual
INTEGRATION enum valuerr::ExecutableModel
OPTIMIZE_REACTION_RATE_SELECTION enum valuerr::ExecutableModel
reset()=0rr::ExecutableModelpure virtual
reset(int options)=0rr::ExecutableModelpure virtual
setBoundarySpeciesConcentrations(int len, int const *indx, double const *values)=0rr::ExecutableModelpure virtual
setCompartmentInitVolumes(int len, int const *indx, double const *values)=0rr::ExecutableModelpure virtual
setFlags(uint32_t)=0rr::ExecutableModelpure virtual
setFloatingSpeciesConcentrations(int len, int const *indx, double const *values)=0rr::ExecutableModelpure virtual
setFloatingSpeciesInitAmounts(int len, int const *indx, double const *values)=0rr::ExecutableModelpure virtual
setFloatingSpeciesInitConcentrations(int len, int const *indx, double const *values)=0rr::ExecutableModelpure virtual
setIntegration(bool value)rr::ExecutableModelinlineprotected
setRandomSeed(int64_t)=0rr::ExecutableModelpure virtual
setStateVector(const double *stateVector)=0rr::ExecutableModelpure virtual
setValue(const std::string &id, double value)=0rr::ExecutableModelpure virtual
~ExecutableModel()rr::ExecutableModelinlinevirtual